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Somehow my subcategories are showing up in the top links menu on the home page. Then when I go to a subcategory, the correct version of my toplinks home page menu appears. I can’t figure out how this happened, but I need to reassign the toplinks menu to my home page. I don’t know my way around well enough to figure it out.
Resolved—I uploaded a new copy of the app folder and it fixed the problem. I must have messed something up while trying to resolve another problem, which is a bug in the 1.3.1 build that prevents products from appearing on the home page. BTW, that problem can be fixed by replacing the index.php file with a copy from an earlier backup.