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Yes, Magento can connect with Accounting and more advanced ERP systems. You can find connectors that just connect the systems together, or you can find cloud solutions like ours, that not only connect the systems but can integrate with additional POS, ERP or eCommerce systems. If you have a Magento store and want to integrate with eBay and an accounting system, out solution would be a great fit. Even if you just want to connect Magento with Account or ERP, we have connectors starting at just $50 a month.
You can read more about our Magento Connector here: http://www.nchannel.com/connect-magento-2/
If you have any questions or would like to chat, feel free to give us a call. We’re in the US.